WormBase Tree Display for Variation: WBVar01700251
expand all nodes | collapse all nodes | view schema
WBVar01700251 | Name | Public_name | WBVar01700251 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00397051 | |||||||
W07B3.2a.2:c.*520A>C | ||||||||
W07B3.2a.1:c.*520A>C | ||||||||
W07B3.2b.1:c.*520A>C | ||||||||
W07B3.2b.2:c.*520A>C | ||||||||
W07B3.2c.1:c.*520A>C | ||||||||
W07B3.2c.2:c.*520A>C | ||||||||
W07B3.2d.2:c.*520A>C | ||||||||
W07B3.2d.1:c.*520A>C | ||||||||
HGVSg | CHROMOSOME_III:g.344419T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | W07B3 | ||||
Flanking_sequences | AGAGGATTTTGTGTGGGAGAGGGATGGGGA | AGAGTATAAGAATTTCGAGACGCAGGGTGA | ||||||
Mapping_target | W07B3 | |||||||
Source_location | 225 | CHROMOSOME_III | 344418 | 344418 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001561 | ||||||
Transcript | W07B3.2b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2b.1:c.*520A>C | |||||||
cDNA_position | 2254 | |||||||
Exon_number | 11/11 | |||||||
W07B3.2d.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2d.2:c.*520A>C | |||||||
cDNA_position | 2188 | |||||||
Exon_number | 10/10 | |||||||
W07B3.2c.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2c.2:c.*520A>C | |||||||
cDNA_position | 2314 | |||||||
Exon_number | 11/11 | |||||||
W07B3.2c.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2c.1:c.*520A>C | |||||||
cDNA_position | 2178 | |||||||
Exon_number | 10/10 | |||||||
W07B3.2a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2a.1:c.*520A>C | |||||||
cDNA_position | 2185 | |||||||
Exon_number | 10/10 | |||||||
W07B3.2b.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2b.2:c.*520A>C | |||||||
cDNA_position | 2344 | |||||||
Exon_number | 12/12 | |||||||
W07B3.2a.2 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2a.2:c.*520A>C | |||||||
cDNA_position | 2312 | |||||||
Exon_number | 11/11 | |||||||
W07B3.2d.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2d.1:c.*520A>C | |||||||
cDNA_position | 2214 | |||||||
Exon_number | 11/11 | |||||||
Method | WGS_Flibotte |