WormBase Tree Display for Variation: WBVar01696845
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WBVar01696845 | Name | Public_name | WBVar01696845 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00393612 | |||||||
H10E21.3a.1:c.481T>G | ||||||||
CE19488:p.Ser179Ala | ||||||||
H10E21.3b.1:c.535T>G | ||||||||
CE28733:p.Ser161Ala | ||||||||
HGVSg | CHROMOSOME_III:g.13652A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | H10E21 | ||||
Flanking_sequences | TTGTAGTTGTTGAGGCGCTGAAGGAGGTGG | CGATGAGATTTTCCGAGGTGTAGGGGTTTT | ||||||
Mapping_target | H10E21 | |||||||
Source_location | 225 | CHROMOSOME_III | 13652 | 13652 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003670 | ||||||
Transcript | H10E21.3b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | H10E21.3b.1:c.535T>G | |||||||
HGVSp | CE19488:p.Ser179Ala | |||||||
cDNA_position | 535 | |||||||
CDS_position | 535 | |||||||
Protein_position | 179 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | Tcc/Gcc | |||||||
Amino_acid_change | S/A | |||||||
H10E21.3a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | H10E21.3a.1:c.481T>G | |||||||
HGVSp | CE28733:p.Ser161Ala | |||||||
cDNA_position | 597 | |||||||
CDS_position | 481 | |||||||
Protein_position | 161 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | Tcc/Gcc | |||||||
Amino_acid_change | S/A | |||||||
Method | WGS_Flibotte |