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WormBase Tree Display for Variation: WBVar01690402

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Name Class

WBVar01690402NamePublic_nameWBVar01690402
Other_namecewivar00382439
F38B2.1b.1:c.22+170T>A
F38B2.1a.1:c.22+581T>A
F38B2.1d.1:c.73+530T>A
HGVSgCHROMOSOME_X:g.11271850T>A
Sequence_detailsSMapS_parentSequenceC03A3
Flanking_sequencesTAAATACTCTTGCTAATATAAAACACCGTGTTGCTGAAAAAATACAGTGTTTTACATAGT
Mapping_targetC03A3
Source_location225CHROMOSOME_X1127178611271786From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002050
TranscriptF38B2.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF38B2.1b.1:c.22+170T>A
Intron_number2/10
F38B2.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF38B2.1d.1:c.73+530T>A
Intron_number1/8
F38B2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF38B2.1a.1:c.22+581T>A
Intron_number2/10
MethodWGS_Flibotte