WormBase Tree Display for Variation: WBVar01690402
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WBVar01690402 | Name | Public_name | WBVar01690402 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00382439 | |||||||
F38B2.1b.1:c.22+170T>A | ||||||||
F38B2.1a.1:c.22+581T>A | ||||||||
F38B2.1d.1:c.73+530T>A | ||||||||
HGVSg | CHROMOSOME_X:g.11271850T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C03A3 | ||||
Flanking_sequences | TAAATACTCTTGCTAATATAAAACACCGTG | TTGCTGAAAAAATACAGTGTTTTACATAGT | ||||||
Mapping_target | C03A3 | |||||||
Source_location | 225 | CHROMOSOME_X | 11271786 | 11271786 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002050 | ||||||
Transcript | F38B2.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1b.1:c.22+170T>A | |||||||
Intron_number | 2/10 | |||||||
F38B2.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1d.1:c.73+530T>A | |||||||
Intron_number | 1/8 | |||||||
F38B2.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F38B2.1a.1:c.22+581T>A | |||||||
Intron_number | 2/10 | |||||||
Method | WGS_Flibotte |