WormBase Tree Display for Variation: WBVar01679216
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WBVar01679216 | Name | Public_name | WBVar01679216 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00369485 | |||||||
F55F3.3b.1:c.25C>T | ||||||||
CE18746:p.Pro23Ser | ||||||||
CE49141:p.Pro9Ser | ||||||||
F55F3.3a.1:c.67C>T | ||||||||
HGVSg | CHROMOSOME_X:g.13768558G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F55F3 | ||||
Flanking_sequences | TATTGTACAAGAATTGCGCAAATGTCTCTG | CTCAGCCTTGGCCTCTCCGTTCATCAGCTG | ||||||
Mapping_target | F55F3 | |||||||
Source_location | 225 | CHROMOSOME_X | 13768490 | 13768490 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010117 | ||||||
Transcript | F55F3.3a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F55F3.3a.1:c.67C>T | |||||||
HGVSp | CE18746:p.Pro23Ser | |||||||
cDNA_position | 113 | |||||||
CDS_position | 67 | |||||||
Protein_position | 23 | |||||||
Exon_number | 3/9 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
F55F3.3b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F55F3.3b.1:c.25C>T | |||||||
HGVSp | CE49141:p.Pro9Ser | |||||||
cDNA_position | 25 | |||||||
CDS_position | 25 | |||||||
Protein_position | 9 | |||||||
Exon_number | 1/7 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
Method | WGS_Flibotte |