WormBase Tree Display for Variation: WBVar01671588
expand all nodes | collapse all nodes | view schema
WBVar01671588 | Name | Public_name | WBVar01671588 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00361594 | |||||||
CE50538:p.Tyr479= | ||||||||
CE19743:p.Tyr1126= | ||||||||
C49C3.4c.1:c.1437T>C | ||||||||
CE48513:p.Tyr542= | ||||||||
C49C3.4b.1:c.1626T>C | ||||||||
C49C3.4a.1:c.3378T>C | ||||||||
HGVSg | CHROMOSOME_IV:g.17326687T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
Flanking_sequences | ATTGGCAAAAGATAATGCTTATCACACTTA | ACCGTTGTTGTAGGTCTAGAGAAGACTAAT | ||||||
Mapping_target | C49C3 | |||||||
Source_location | 225 | CHROMOSOME_IV | 17326650 | 17326650 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008194 | ||||||
Transcript | C49C3.4c.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4c.1:c.1437T>C | |||||||
HGVSp | CE50538:p.Tyr479= | |||||||
cDNA_position | 1437 | |||||||
CDS_position | 1437 | |||||||
Protein_position | 479 | |||||||
Exon_number | 8/15 | |||||||
Codon_change | taT/taC | |||||||
Amino_acid_change | Y | |||||||
C49C3.4b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4b.1:c.1626T>C | |||||||
HGVSp | CE48513:p.Tyr542= | |||||||
cDNA_position | 1626 | |||||||
CDS_position | 1626 | |||||||
Protein_position | 542 | |||||||
Exon_number | 9/16 | |||||||
Codon_change | taT/taC | |||||||
Amino_acid_change | Y | |||||||
C49C3.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4a.1:c.3378T>C | |||||||
HGVSp | CE19743:p.Tyr1126= | |||||||
cDNA_position | 3381 | |||||||
CDS_position | 3378 | |||||||
Protein_position | 1126 | |||||||
Exon_number | 16/24 | |||||||
Codon_change | taT/taC | |||||||
Amino_acid_change | Y | |||||||
Method | WGS_Flibotte |