WormBase Tree Display for Variation: WBVar01671544
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WBVar01671544 | Name | Public_name | WBVar01671544 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00361550 | |||||||
CE19743:p.Leu810= | ||||||||
CE50538:p.Leu163= | ||||||||
C49C3.4b.1:c.676T>C | ||||||||
C49C3.4a.1:c.2428T>C | ||||||||
C49C3.4c.1:c.487T>C | ||||||||
CE48513:p.Leu226= | ||||||||
HGVSg | CHROMOSOME_IV:g.17324699T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
Flanking_sequences | TTTGTCAGAAACATTGGTTCAAATAGATTC | TATCACTTGGAAGTTCCATTGGAACTTTAA | ||||||
Mapping_target | C49C3 | |||||||
Source_location | 225 | CHROMOSOME_IV | 17324662 | 17324662 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008194 | ||||||
Transcript | C49C3.4c.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4c.1:c.487T>C | |||||||
HGVSp | CE50538:p.Leu163= | |||||||
cDNA_position | 487 | |||||||
CDS_position | 487 | |||||||
Protein_position | 163 | |||||||
Exon_number | 4/15 | |||||||
Codon_change | Tta/Cta | |||||||
Amino_acid_change | L | |||||||
C49C3.4b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4b.1:c.676T>C | |||||||
HGVSp | CE48513:p.Leu226= | |||||||
cDNA_position | 676 | |||||||
CDS_position | 676 | |||||||
Protein_position | 226 | |||||||
Exon_number | 5/16 | |||||||
Codon_change | Tta/Cta | |||||||
Amino_acid_change | L | |||||||
C49C3.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C49C3.4a.1:c.2428T>C | |||||||
HGVSp | CE19743:p.Leu810= | |||||||
cDNA_position | 2431 | |||||||
CDS_position | 2428 | |||||||
Protein_position | 810 | |||||||
Exon_number | 12/24 | |||||||
Codon_change | Tta/Cta | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |