WormBase Tree Display for Variation: WBVar01660998
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| WBVar01660998 | Name | Public_name | WBVar01660998 | |||||
|---|---|---|---|---|---|---|---|---|
| Other_name | cewivar00348965 | |||||||
| CE50538:p.Asn62= | ||||||||
| C49C3.4b.1:c.375T>C | ||||||||
| CE19743:p.Asn709= | ||||||||
| CE48513:p.Asn125= | ||||||||
| C49C3.4c.1:c.186T>C | ||||||||
| C49C3.4a.1:c.2127T>C | ||||||||
| HGVSg | CHROMOSOME_IV:g.17324193T>C | |||||||
| Sequence_details | SMap | S_parent | Sequence | C49C3 | ||||
| Flanking_sequences | GGAAGGGTCCATAATCATCCTCCTTGTAAA | CGTTTGCCTAAGAATGATGATGACCTTATT | ||||||
| Mapping_target | C49C3 | |||||||
| Source_location | 225 | CHROMOSOME_IV | 17324156 | 17324156 | From_analysis | Million_mutation_project_reanalysis | ||
| Type_of_mutation | Substitution | T | C | |||||
| SeqStatus | Sequenced | |||||||
| Variation_type | Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
| Laboratory | VC | |||||||
| Analysis | Million_mutation_project_reanalysis | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00008194 | ||||||
| Transcript | C49C3.4c.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | |||||||
| HGVSc | C49C3.4c.1:c.186T>C | |||||||
| HGVSp | CE50538:p.Asn62= | |||||||
| cDNA_position | 186 | |||||||
| CDS_position | 186 | |||||||
| Protein_position | 62 | |||||||
| Exon_number | 3/15 | |||||||
| Codon_change | aaT/aaC | |||||||
| Amino_acid_change | N | |||||||
| C49C3.4b.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | C49C3.4b.1:c.375T>C | |||||||
| HGVSp | CE48513:p.Asn125= | |||||||
| cDNA_position | 375 | |||||||
| CDS_position | 375 | |||||||
| Protein_position | 125 | |||||||
| Exon_number | 4/16 | |||||||
| Codon_change | aaT/aaC | |||||||
| Amino_acid_change | N | |||||||
| C49C3.4a.1 | VEP_consequence | synonymous_variant | ||||||
| VEP_impact | LOW | |||||||
| HGVSc | C49C3.4a.1:c.2127T>C | |||||||
| HGVSp | CE19743:p.Asn709= | |||||||
| cDNA_position | 2130 | |||||||
| CDS_position | 2127 | |||||||
| Protein_position | 709 | |||||||
| Exon_number | 11/24 | |||||||
| Codon_change | aaT/aaC | |||||||
| Amino_acid_change | N | |||||||
| Method | WGS_Flibotte |
