WormBase Tree Display for Variation: WBVar01655877
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WBVar01655877 | Name | Public_name | WBVar01655877 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00343516 | |||||||
Y71H2AM.5.2:c.-5+20434A>G | ||||||||
Y71H2AM.11.1:c.705-399T>C | ||||||||
HGVSg | CHROMOSOME_III:g.2720118A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y71H2AM | ||||
Flanking_sequences | CCTCGGGGAGTACACGAGTTGCGTAAATCG | CACATGGCCGTGGAAGAGGTTCTACACACG | ||||||
Mapping_target | Y71H2AM | |||||||
Source_location | 225 | CHROMOSOME_III | 2720110 | 2720110 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022170 | ||||||
WBGene00022176 | ||||||||
Transcript | Y71H2AM.5.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71H2AM.5.2:c.-5+20434A>G | |||||||
Intron_number | 1/5 | |||||||
Y71H2AM.11.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y71H2AM.11.1:c.705-399T>C | |||||||
Intron_number | 6/8 | |||||||
Method | WGS_Flibotte |