WormBase Tree Display for Variation: WBVar01644887
expand all nodes | collapse all nodes | view schema
WBVar01644887 | Name | Public_name | WBVar01644887 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00331197 | |||||||
F01F1.12.1:c.876+2T>C | ||||||||
F01F1.12.2:c.876+2T>C | ||||||||
HGVSg | CHROMOSOME_III:g.5875048A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F01F1 | ||||
Flanking_sequences | ATATAAGGTTATTCCATTTCGTTTAAATTT | CCGAGTTAATAGCATTGAGGTTAGCAGTGG | ||||||
Mapping_target | F01F1 | |||||||
Source_location | 225 | CHROMOSOME_III | 5875003 | 5875003 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00017166 | ||||||
Transcript | F01F1.12.2 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F01F1.12.2:c.876+2T>C | |||||||
Intron_number | 5/6 | |||||||
F01F1.12.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | F01F1.12.1:c.876+2T>C | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |