WormBase Tree Display for Variation: WBVar01640675
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WBVar01640675 | Name | Public_name | WBVar01640675 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00322770 | |||||||
CE49746:p.Leu72= | ||||||||
Y23H5A.7c.1:c.216C>T | ||||||||
CE54491:p.Leu71= | ||||||||
Y23H5A.7b.1:c.213C>T | ||||||||
HGVSg | CHROMOSOME_I:g.2626961G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y23H5A | ||||
Flanking_sequences | CCTGAAGACTCTTCTCAAAATATCCAAAGA | AGATAGGATCGAGCATGGCCCATATGCGAA | ||||||
Mapping_target | Y23H5A | |||||||
Source_location | 225 | CHROMOSOME_I | 2626963 | 2626963 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00305693 | ||||||
WBGene00000800 | ||||||||
Transcript | Y23H5A.12 | |||||||
Y23H5A.7c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y23H5A.7c.1:c.216C>T | |||||||
HGVSp | CE49746:p.Leu72= | |||||||
cDNA_position | 216 | |||||||
CDS_position | 216 | |||||||
Protein_position | 72 | |||||||
Exon_number | 3/7 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Y23H5A.7b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y23H5A.7b.1:c.213C>T | |||||||
HGVSp | CE54491:p.Leu71= | |||||||
cDNA_position | 213 | |||||||
CDS_position | 213 | |||||||
Protein_position | 71 | |||||||
Exon_number | 3/8 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |