WormBase Tree Display for Variation: WBVar01624506
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WBVar01624506 | Name | Public_name | WBVar01624506 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00304530 | |||||||
CE29047:p.Asn503= | ||||||||
CE40074:p.Asn363= | ||||||||
F56D12.1b.1:c.*538C>T | ||||||||
F56D12.1a.1:c.1509C>T | ||||||||
F56D12.1a.2:c.1509C>T | ||||||||
F56D12.1d.1:c.1089C>T | ||||||||
HGVSg | CHROMOSOME_II:g.1306568G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | TGATCCAGTTGATTTGTCGTTGAGGTACAT | TTGCCGACGGCGTCGCGGAGAACATCGCGA | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1306575 | 1306575 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1b.1:c.*538C>T | |||||||
cDNA_position | 2079 | |||||||
Exon_number | 8/8 | |||||||
F56D12.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.2:c.1509C>T | |||||||
HGVSp | CE29047:p.Asn503= | |||||||
cDNA_position | 1608 | |||||||
CDS_position | 1509 | |||||||
Protein_position | 503 | |||||||
Exon_number | 9/10 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.1:c.1509C>T | |||||||
HGVSp | CE29047:p.Asn503= | |||||||
cDNA_position | 1512 | |||||||
CDS_position | 1509 | |||||||
Protein_position | 503 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1d.1:c.1089C>T | |||||||
HGVSp | CE40074:p.Asn363= | |||||||
cDNA_position | 1089 | |||||||
CDS_position | 1089 | |||||||
Protein_position | 363 | |||||||
Exon_number | 4/4 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
Method | WGS_Flibotte |