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WormBase Tree Display for Variation: WBVar01624506

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Name Class

WBVar01624506NamePublic_nameWBVar01624506
Other_namecewivar00304530
CE29047:p.Asn503=
CE40074:p.Asn363=
F56D12.1b.1:c.*538C>T
F56D12.1a.1:c.1509C>T
F56D12.1a.2:c.1509C>T
F56D12.1d.1:c.1089C>T
HGVSgCHROMOSOME_II:g.1306568G>A
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesTGATCCAGTTGATTTGTCGTTGAGGTACATTTGCCGACGGCGTCGCGGAGAACATCGCGA
Mapping_targetF56D12
Source_location225CHROMOSOME_II13065751306575From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006625From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF56D12.1b.1:c.*538C>T
cDNA_position2079
Exon_number8/8
F56D12.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.2:c.1509C>T
HGVSpCE29047:p.Asn503=
cDNA_position1608
CDS_position1509
Protein_position503
Exon_number9/10
Codon_changeaaC/aaT
Amino_acid_changeN
F56D12.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.1:c.1509C>T
HGVSpCE29047:p.Asn503=
cDNA_position1512
CDS_position1509
Protein_position503
Exon_number8/9
Codon_changeaaC/aaT
Amino_acid_changeN
F56D12.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1d.1:c.1089C>T
HGVSpCE40074:p.Asn363=
cDNA_position1089
CDS_position1089
Protein_position363
Exon_number4/4
Codon_changeaaC/aaT
Amino_acid_changeN
MethodWGS_Flibotte