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WormBase Tree Display for Variation: WBVar01621878

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Name Class

WBVar01621878NamePublic_nameWBVar01621878
Other_namecewivar00301653
F22E10.3.1:c.3810C>T
CE03262:p.Ala1270=
F16H9.2b.1:c.35-37878C>T
F16H9.2a.1:c.-23-37878C>T
HGVSgCHROMOSOME_X:g.12745181G>A
Sequence_detailsSMapS_parentSequenceF22E10
Flanking_sequencesGGCAATTGTGATACACGTACGACCTTCTCGGCACGATCTAATGCCTCTTGTACAGCCTGA
Mapping_targetF22E10
Source_location225CHROMOSOME_X1274511112745111From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00004008
WBGene00008901
TranscriptF16H9.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16H9.2b.1:c.35-37878C>T
Intron_number1/3
F16H9.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16H9.2a.1:c.-23-37878C>T
Intron_number1/4
F22E10.3.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF22E10.3.1:c.3810C>T
HGVSpCE03262:p.Ala1270=
cDNA_position3835
CDS_position3810
Protein_position1270
Exon_number9/10
Codon_changegcC/gcT
Amino_acid_changeA
MethodWGS_Flibotte