WormBase Tree Display for Variation: WBVar01621685
expand all nodes | collapse all nodes | view schema
WBVar01621685 | Name | Public_name | WBVar01621685 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00301451 | |||||||
H20J18.1a.3:c.-99+5019A>T | ||||||||
H20J18.1c.1:c.304+5019A>T | ||||||||
H20J18.1f.1:c.-99+5019A>T | ||||||||
HGVSg | CHROMOSOME_X:g.12520399T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C16D6 | ||||
Flanking_sequences | TGGTTCATTAAAAAAGTTGAAACTTCATCGATTAAATCGCATTTTCTTCTTCCATGGTAT | CGATTCAGAAAATTCAAAGAGACAGTTAGA | ||||||
Mapping_target | C16D6 | |||||||
Source_location | 225 | CHROMOSOME_X | 12520330 | 12520330 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004739 | ||||||
Transcript | H20J18.1a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.3:c.-99+5019A>T | |||||||
Intron_number | 1/14 | |||||||
H20J18.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.1:c.-99+5019A>T | |||||||
Intron_number | 1/14 | |||||||
H20J18.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1c.1:c.304+5019A>T | |||||||
Intron_number | 1/12 | |||||||
Method | WGS_Flibotte |