WormBase Tree Display for Variation: WBVar01620590
expand all nodes | collapse all nodes | view schema
WBVar01620590 | Name | Public_name | WBVar01620590 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00300290 | |||||||
T25C12.1b.1:c.*1003C>T | ||||||||
T25C12.1a.1:c.*1003C>T | ||||||||
HGVSg | CHROMOSOME_X:g.11485270C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T25C12 | ||||
Flanking_sequences | TCCCGCCGTTTTAGCTTTTAATGTTAAAAT | AGGAACTTTTGAAAATGATCTTCACCTCAT | ||||||
Mapping_target | T25C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 11485205 | 11485205 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003003 | ||||||
Transcript | T25C12.1b.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T25C12.1b.1:c.*1003C>T | |||||||
cDNA_position | 2748 | |||||||
Exon_number | 12/12 | |||||||
T25C12.1a.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T25C12.1a.1:c.*1003C>T | |||||||
cDNA_position | 2745 | |||||||
Exon_number | 14/14 | |||||||
Method | WGS_Flibotte |