WormBase Tree Display for Variation: WBVar01602079

WBVar01602079 Name: Public_name: WBVar01602079
    Other_name: cewivar00275258
      C25A11.4a.1:c.-493+799C>T
      C25A11.4c.1:c.783+799C>T
      H08J11.t2.1:n.6C>T
      C25A11.4f.1:c.783+799C>T
      C25A11.4b.1:c.783+799C>T
      C25A11.4a.3:c.-493+799C>T
      C25A11.4d.1:c.783+799C>T
      C25A11.4a.2:c.-493+799C>T
      H08J11.13:n.70G>A
    HGVSg: CHROMOSOME_X:g.9091315C>T
  Sequence_details: SMap: S_parent: Sequence: H08J11
    Flanking_sequences: TTAATTGAGAATCCAGCTTTTGCCAGGTTC ATGGTGTAGCGGTTAGCACTCAGGACTTTGAATCCTGCGACCCGAGTTCAAATCTCAGTG
    Mapping_target: H08J11
    Source_location: 225 CHROMOSOME_X 9091259 9091259 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00023079
      WBGene00202176
      WBGene00000100
    Transcript: C25A11.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4d.1:c.783+799C>T
        Intron_number: 7/29
      C25A11.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4a.1:c.-493+799C>T
        Intron_number: 6/30
      C25A11.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4f.1:c.783+799C>T
        Intron_number: 6/28
      C25A11.4a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4a.3:c.-493+799C>T
        Intron_number: 1/25
      C25A11.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4c.1:c.783+799C>T
        Intron_number: 7/23
      H08J11.t2 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: H08J11.t2.1:n.6C>T
        cDNA_position: 6
        Exon_number: 1/1
      C25A11.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4a.2:c.-493+799C>T
        Intron_number: 2/26
      C25A11.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C25A11.4b.1:c.783+799C>T
        Intron_number: 6/18
      H08J11.13 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: H08J11.13:n.70G>A
        cDNA_position: 70
        Exon_number: 1/1
  Method: WGS_Flibotte