WormBase Tree Display for Variation: WBVar01593989
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WBVar01593989 | Name | Public_name | WBVar01593989 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00254109 | |||||||
T20B3.2.1:c.57+13T>C | ||||||||
T20B3.7.2:c.208+1517A>G | ||||||||
T20B3.7.1:c.208+1517A>G | ||||||||
HGVSg | CHROMOSOME_V:g.16835040A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | T20B3 | ||||
Flanking_sequences | TGAAATTAATTTTAAGTAATCTGAAAATTG | GCAACTTCTTACGTCCTCAACATCAGCCTG | ||||||
Mapping_target | T20B3 | |||||||
Source_location | 225 | CHROMOSOME_V | 16835018 | 16835018 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006585 | ||||||
WBGene00004026 | ||||||||
Transcript | T20B3.2.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T20B3.2.1:c.57+13T>C | |||||||
Intron_number | 2/5 | |||||||
T20B3.7.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T20B3.7.1:c.208+1517A>G | |||||||
Intron_number | 3/7 | |||||||
T20B3.7.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T20B3.7.2:c.208+1517A>G | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |