WormBase Tree Display for Variation: WBVar01590615
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WBVar01590615 | Name | Public_name | WBVar01590615 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00245503 | |||||||
C29F3.1.2:c.2022C>T | ||||||||
CE08435:p.Val674= | ||||||||
C29F3.1.1:c.2022C>T | ||||||||
HGVSg | CHROMOSOME_V:g.15358038G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C29F3 | ||||
Flanking_sequences | ACCTTCTTCAAGACAAAGAAGTGCCTCATT | ACAAATCGAGAGACGAGACGAAGTTGACGG | ||||||
Mapping_target | C29F3 | |||||||
Source_location | 225 | CHROMOSOME_V | 15358021 | 15358021 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001150 | ||||||
Transcript | C29F3.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C29F3.1.1:c.2022C>T | |||||||
HGVSp | CE08435:p.Val674= | |||||||
cDNA_position | 2022 | |||||||
CDS_position | 2022 | |||||||
Protein_position | 674 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
C29F3.1.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C29F3.1.2:c.2022C>T | |||||||
HGVSp | CE08435:p.Val674= | |||||||
cDNA_position | 2145 | |||||||
CDS_position | 2022 | |||||||
Protein_position | 674 | |||||||
Exon_number | 6/7 | |||||||
Codon_change | gtC/gtT | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |