WormBase Tree Display for Variation: WBVar01569883
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WBVar01569883 | Name | Public_name | WBVar01569883 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00155804 | |||||||
C25G4.1.1:c.1468G>C | ||||||||
CE49919:p.Ala490Pro | ||||||||
HGVSg | CHROMOSOME_IV:g.12441143G>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C25G4 | ||||
Flanking_sequences | GATTACTGTATTTCAATGGACTTGAGTGCAGGATCTACTAGAGGAAAATATAAATATTTA | CATGTCAGAGTACCGTTATTAATTCGTTAT | ||||||
Mapping_target | C25G4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12441120 | 12441120 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007729 | ||||||
Transcript | C25G4.1.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 1 | tolerated | ||||||
PolyPhen | 0 | unknown | ||||||
HGVSc | C25G4.1.1:c.1468G>C | |||||||
HGVSp | CE49919:p.Ala490Pro | |||||||
cDNA_position | 1488 | |||||||
CDS_position | 1468 | |||||||
Protein_position | 490 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | Gca/Cca | |||||||
Amino_acid_change | A/P | |||||||
Method | WGS_Flibotte |