WormBase Tree Display for Variation: WBVar01560183
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WBVar01560183 | Name | Public_name | WBVar01560183 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00140736 | |||||||
CE36414:p.Pro299= | ||||||||
Y46G5A.17.1:c.897G>A | ||||||||
Y46G5A.17.2:c.897G>A | ||||||||
HGVSg | CHROMOSOME_II:g.12793798C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y46G5A | ||||
Flanking_sequences | CTGCATTGTACAGAATGGAACCTTTGTCCG | GGGGAAATCGAGAACGGCGAGACCTCTTGA | ||||||
Mapping_target | Y46G5A | |||||||
Source_location | 225 | CHROMOSOME_II | 12793728 | 12793728 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012907 | ||||||
Transcript | Y46G5A.17.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y46G5A.17.1:c.897G>A | |||||||
HGVSp | CE36414:p.Pro299= | |||||||
cDNA_position | 1009 | |||||||
CDS_position | 897 | |||||||
Protein_position | 299 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | ccG/ccA | |||||||
Amino_acid_change | P | |||||||
Y46G5A.17.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y46G5A.17.2:c.897G>A | |||||||
HGVSp | CE36414:p.Pro299= | |||||||
cDNA_position | 1009 | |||||||
CDS_position | 897 | |||||||
Protein_position | 299 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | ccG/ccA | |||||||
Amino_acid_change | P | |||||||
Method | WGS_Flibotte |