WormBase Tree Display for Variation: WBVar01555009
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WBVar01555009 | Name | Public_name | WBVar01555009 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00132413 | |||||||
Y48G1BM.6a.1:c.540+19T>A | ||||||||
Y48G1BM.10.1:c.-1029T>A | ||||||||
HGVSg | CHROMOSOME_I:g.233764A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y48G1BM | ||||
Flanking_sequences | CTGAAAATTTTCAAAATTTGAAACTTTTCG | GAAAAATAAAAATCTCACCACAGCATTTCG | ||||||
Mapping_target | Y48G1BM | |||||||
Source_location | 225 | CHROMOSOME_I | 233764 | 233764 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (18) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021671 | ||||||
WBGene00306121 | ||||||||
Transcript | Y48G1BM.6a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y48G1BM.6a.1:c.540+19T>A | |||||||
Intron_number | 4/7 | |||||||
Y48G1BM.10.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y48G1BM.10.1:c.-1029T>A | |||||||
cDNA_position | 664 | |||||||
Exon_number | 1/4 | |||||||
Method | WGS_Flibotte |