WormBase Tree Display for Variation: WBVar01554908
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WBVar01554908 | Name | Public_name | WBVar01554908 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00132304 | |||||||
CE39537:p.Ser102= | ||||||||
ZK54.1b.1:c.306C>T | ||||||||
ZK54.1a.1:c.321C>T | ||||||||
CE31271:p.Ser107= | ||||||||
HGVSg | CHROMOSOME_X:g.17463101G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | ZK54 | ||||
Flanking_sequences | AGTGTATGCGAGATATCCGCCGGGCAGTTG | GAGACGATATAGCCGTAAAAAAAGGAACTG | ||||||
Mapping_target | ZK54 | |||||||
Source_location | 225 | CHROMOSOME_X | 17463027 | 17463027 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022647 | ||||||
Transcript | ZK54.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | ZK54.1a.1:c.321C>T | |||||||
HGVSp | CE31271:p.Ser107= | |||||||
cDNA_position | 362 | |||||||
CDS_position | 321 | |||||||
Protein_position | 107 | |||||||
Exon_number | 4/12 | |||||||
Codon_change | tcC/tcT | |||||||
Amino_acid_change | S | |||||||
ZK54.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | ZK54.1b.1:c.306C>T | |||||||
HGVSp | CE39537:p.Ser102= | |||||||
cDNA_position | 337 | |||||||
CDS_position | 306 | |||||||
Protein_position | 102 | |||||||
Exon_number | 4/12 | |||||||
Codon_change | tcC/tcT | |||||||
Amino_acid_change | S | |||||||
Method | WGS_Flibotte |