WormBase Tree Display for Variation: WBVar01554460
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WBVar01554460 | Name | Public_name | WBVar01554460 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00131835 | |||||||
CE38081:p.Glu393= | ||||||||
F59C12.1b.1:c.1179G>A | ||||||||
CE54265:p.Glu393= | ||||||||
F59C12.1a.1:c.1179G>A | ||||||||
HGVSg | CHROMOSOME_X:g.16600420G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F59C12 | ||||
Flanking_sequences | TGGAAATGTCGTGCTCCGTAAGAAACTCGA | AAGCCCGAAACATTGAATGTTACCGCGAGT | ||||||
Mapping_target | F59C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 16600347 | 16600347 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000401 | ||||||
Transcript | F59C12.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F59C12.1a.1:c.1179G>A | |||||||
HGVSp | CE38081:p.Glu393= | |||||||
cDNA_position | 1181 | |||||||
CDS_position | 1179 | |||||||
Protein_position | 393 | |||||||
Exon_number | 11/16 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
F59C12.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F59C12.1b.1:c.1179G>A | |||||||
HGVSp | CE54265:p.Glu393= | |||||||
cDNA_position | 1188 | |||||||
CDS_position | 1179 | |||||||
Protein_position | 393 | |||||||
Exon_number | 11/16 | |||||||
Codon_change | gaG/gaA | |||||||
Amino_acid_change | E | |||||||
Method | WGS_Flibotte |