WormBase Tree Display for Variation: WBVar01552675
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WBVar01552675 | Name | Public_name | WBVar01552675 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00129892 | |||||||
R03E1.1.1:c.489C>T | ||||||||
CE18901:p.Thr163= | ||||||||
HGVSg | CHROMOSOME_X:g.14168745G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | R03E1 | ||||
Flanking_sequences | AAAAAATGCAATTCTCGCCTGACTCACCAC | GTCTCGTTTTTCACAATCATTTTATGATGC | ||||||
Mapping_target | R03E1 | |||||||
Source_location | 225 | CHROMOSOME_X | 14168676 | 14168676 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006369 | ||||||
Transcript | R03E1.1.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | R03E1.1.1:c.489C>T | |||||||
HGVSp | CE18901:p.Thr163= | |||||||
cDNA_position | 512 | |||||||
CDS_position | 489 | |||||||
Protein_position | 163 | |||||||
Exon_number | 4/12 | |||||||
Codon_change | acC/acT | |||||||
Amino_acid_change | T | |||||||
Method | WGS_Flibotte |