WormBase Tree Display for Variation: WBVar01549465
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WBVar01549465 | Name | Public_name | WBVar01549465 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00125627 | |||||||
F39C12.2a.1:c.444+23T>A | ||||||||
F39C12.2d.1:c.444+23T>A | ||||||||
F39C12.2c.1:c.444+23T>A | ||||||||
F39C12.2e.1:c.444+23T>A | ||||||||
F39C12.2b.1:c.444+23T>A | ||||||||
HGVSg | CHROMOSOME_X:g.4858939A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | AAGTTTTAAATTTTTGTGGTAATTTTAAAA | GTCAATACTTCAAGCACCCTACCGAGATTT | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4858909 | 4858909 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (12) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000072 | ||||||
Transcript | F39C12.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2b.1:c.444+23T>A | |||||||
Intron_number | 5/19 | |||||||
F39C12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2a.1:c.444+23T>A | |||||||
Intron_number | 4/16 | |||||||
F39C12.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2c.1:c.444+23T>A | |||||||
Intron_number | 5/18 | |||||||
F39C12.2e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2e.1:c.444+23T>A | |||||||
Intron_number | 4/15 | |||||||
F39C12.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.2d.1:c.444+23T>A | |||||||
Intron_number | 4/16 | |||||||
Method | WGS_Flibotte |