WormBase Tree Display for Variation: WBVar01541277

WBVar01541277 Name: Public_name: WBVar01541277
    Other_name: cewivar00104649
      CE50158:p.Ile1747Ser
      CE50204:p.Ile1905Ser
      Y55D5A.5c.1:c.5714T>G
      Y55D5A.5e.1:c.5240T>G
      Y55D5A.5g.1:c.1946T>G
      CE50215:p.Ile1013Ser
      Y55D5A.5f.1:c.3038T>G
      Y55D5A.5d.1:c.5327T>G
      CE50312:p.Ile1776Ser
      CE46852:p.Ile1823Ser
      CE50631:p.Ile649Ser
      Y55D5A.5a.1:c.5468T>G
    HGVSg: CHROMOSOME_III:g.2995992A>C
  Sequence_details: SMap: S_parent: Sequence: Y55D5A
    Flanking_sequences: TTTTCACCGAAAGCCGAACGTCCGTTGAAA TGTCACGGCTGTTGCCGTTTCGCTGAAAAA
    Mapping_target: Y55D5A
    Source_location: 225 CHROMOSOME_III 2995984 2995984 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006631 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006640 From_analysis: Million_mutation_project_reanalysis
      WBStrain00008273 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022878 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022883 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022887 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023139 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023665 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027648 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027660 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027662 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000898
    Transcript: Y55D5A.5g.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 1 tolerated_low_confidence
        PolyPhen: 0 benign
        HGVSc: Y55D5A.5g.1:c.1946T>G
        HGVSp: CE50631:p.Ile649Ser
        cDNA_position: 1946
        CDS_position: 1946
        Protein_position: 649
        Exon_number: 4/4
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
      Y55D5A.5e.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 1 tolerated_low_confidence
        PolyPhen: 0 benign
        HGVSc: Y55D5A.5e.1:c.5240T>G
        HGVSp: CE50158:p.Ile1747Ser
        cDNA_position: 5240
        CDS_position: 5240
        Protein_position: 1747
        Exon_number: 15/15
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
      Y55D5A.5f.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 1 tolerated_low_confidence
        PolyPhen: 0 benign
        HGVSc: Y55D5A.5f.1:c.3038T>G
        HGVSp: CE50215:p.Ile1013Ser
        cDNA_position: 3038
        CDS_position: 3038
        Protein_position: 1013
        Exon_number: 8/8
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
      Y55D5A.5a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 1 tolerated_low_confidence
        PolyPhen: 0.001 benign
        HGVSc: Y55D5A.5a.1:c.5468T>G
        HGVSp: CE46852:p.Ile1823Ser
        cDNA_position: 5566
        CDS_position: 5468
        Protein_position: 1823
        Exon_number: 18/19
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
      Y55D5A.5c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 0.94 tolerated_low_confidence
        PolyPhen: 0.001 benign
        HGVSc: Y55D5A.5c.1:c.5714T>G
        HGVSp: CE50204:p.Ile1905Ser
        cDNA_position: 5877
        CDS_position: 5714
        Protein_position: 1905
        Exon_number: 20/21
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
      Y55D5A.5d.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        SIFT: 1 tolerated_low_confidence
        PolyPhen: 0.001 benign
        HGVSc: Y55D5A.5d.1:c.5327T>G
        HGVSp: CE50312:p.Ile1776Ser
        cDNA_position: 5327
        CDS_position: 5327
        Protein_position: 1776
        Exon_number: 16/16
        Codon_change: aTt/aGt
        Amino_acid_change: I/S
  Method: WGS_Flibotte