WormBase Tree Display for Variation: WBVar01536611
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WBVar01536611 | Name | Public_name | WBVar01536611 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00086282 | |||||||
F08D12.5a.1:n.261-3C>T | ||||||||
F08D12.5b.1:n.169-3C>T | ||||||||
HGVSg | CHROMOSOME_II:g.2776850C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F08D12 | ||||
Flanking_sequences | CTTCTGGCCATGTTAAACAATGCTCATTTA | AGAGATCCGTGCCTAACACCGACCTGAGCC | ||||||
Mapping_target | F08D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 2776855 | 2776855 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00043239 | ||||||
Pseudogene | F08D12.5a | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F08D12.5a.1:n.261-3C>T | |||||||
Intron_number | 2/6 | |||||||
F08D12.5b | VEP_consequence | splice_region_variant,intron_variant,non_coding_transcript_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F08D12.5b.1:n.169-3C>T | |||||||
Intron_number | 1/5 | |||||||
Method | WGS_Flibotte |