WormBase Tree Display for Pseudogene: F08D12.5a
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F08D12.5a | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | F08D12 | ||
Structure | Source_exons | 1 | 168 | ||
1137 | 1228 | ||||
1620 | 1745 | ||||
1792 | 1939 | ||||
1994 | 2179 | ||||
2222 | 2379 | ||||
2429 | 2582 | ||||
DB_info | DB_remark | coding pseudogene | |||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Type | Coding_pseudogene | ||||
Attributes | Transcribed | ||||
SubType | unprocessed_pseudogene | ||||
Properties | Isoform | Curator_confirmed | WBPerson1983 | ||
Visible | Gene | WBGene00043239 | |||
Brief_identification | Curated pseudogene | ||||
Corresponding_PCR_product | mv_F08D12.5 | ||||
sjj_F08D12.5 | |||||
Corresponding_oligo_set | 185500_at | ||||
Aff_F08D12.5 | |||||
cea2.3.08583 | |||||
Variation (79) | |||||
Microarray_results | SMD_F08D12.5 | ||||
185500_at | |||||
Aff_F08D12.5 | |||||
cea2.3.08583 | |||||
RNASeq_FPKM (74) | |||||
Last_reviewed | 30 Jun 2014 00:00:00 | WBPerson1983 | |||
Remark | [140630 pad] Split from F08D12.3 based on RNASeq data and protein analysis, it seems that there have been duplication events in this region and malformed Transcription. This represents a degraded copy of F08D12.4 with multiple frame and PTS issues. | Curator_confirmed | WBPerson1983 | ||
From_analysis | RNASeq | ||||
Method | Pseudogene |