WormBase Tree Display for Variation: WBVar01533980
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WBVar01533980 | Name | Public_name | WBVar01533980 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00080101 | |||||||
F56D12.1c.1:c.411A>C | ||||||||
F56D12.1b.1:c.411A>C | ||||||||
CE33403:p.Gly137= | ||||||||
F56D12.1a.1:c.411A>C | ||||||||
CE29047:p.Gly137= | ||||||||
F56D12.1a.2:c.411A>C | ||||||||
CE37118:p.Gly137= | ||||||||
HGVSg | CHROMOSOME_II:g.1309012T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | CGTGGAGGCGTTCAGCTTCATTCGGTACTT | CCAGCGGCCAAATCGGCGGCGCGGAGCAAA | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1309019 | 1309019 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1b.1:c.411A>C | |||||||
HGVSp | CE33403:p.Gly137= | |||||||
cDNA_position | 413 | |||||||
CDS_position | 411 | |||||||
Protein_position | 137 | |||||||
Exon_number | 5/8 | |||||||
Codon_change | ggA/ggC | |||||||
Amino_acid_change | G | |||||||
F56D12.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.2:c.411A>C | |||||||
HGVSp | CE29047:p.Gly137= | |||||||
cDNA_position | 510 | |||||||
CDS_position | 411 | |||||||
Protein_position | 137 | |||||||
Exon_number | 6/10 | |||||||
Codon_change | ggA/ggC | |||||||
Amino_acid_change | G | |||||||
F56D12.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.1:c.411A>C | |||||||
HGVSp | CE29047:p.Gly137= | |||||||
cDNA_position | 414 | |||||||
CDS_position | 411 | |||||||
Protein_position | 137 | |||||||
Exon_number | 5/9 | |||||||
Codon_change | ggA/ggC | |||||||
Amino_acid_change | G | |||||||
F56D12.1c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1c.1:c.411A>C | |||||||
HGVSp | CE37118:p.Gly137= | |||||||
cDNA_position | 411 | |||||||
CDS_position | 411 | |||||||
Protein_position | 137 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | ggA/ggC | |||||||
Amino_acid_change | G | |||||||
Method | WGS_Flibotte |