WormBase Tree Display for Variation: WBVar01533977
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WBVar01533977 | Name | Public_name | WBVar01533977 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00080095 | |||||||
F56D12.1d.1:c.258+7C>A | ||||||||
F56D12.1c.1:c.678+7C>A | ||||||||
F56D12.1b.1:c.678+7C>A | ||||||||
F56D12.1a.1:c.678+7C>A | ||||||||
F56D12.1a.2:c.678+7C>A | ||||||||
HGVSg | CHROMOSOME_II:g.1308738G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | TCGGCTTTTCAAGGCTATTTCTAGTTTTTT | GCACACCATAAGCGCCGGAGCAGTCGGCAA | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1308745 | 1308745 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1b.1:c.678+7C>A | |||||||
Intron_number | 5/7 | |||||||
F56D12.1a.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.2:c.678+7C>A | |||||||
Intron_number | 6/9 | |||||||
F56D12.1a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.1:c.678+7C>A | |||||||
Intron_number | 5/8 | |||||||
F56D12.1d.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1d.1:c.258+7C>A | |||||||
Intron_number | 1/3 | |||||||
F56D12.1c.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1c.1:c.678+7C>A | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |