WormBase Tree Display for Variation: WBVar01533968
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WBVar01533968 | Name | Public_name | WBVar01533968 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00080086 | |||||||
F56D12.1b.1:c.679-250A>G | ||||||||
F56D12.1c.1:c.679-250A>G | ||||||||
F56D12.1a.2:c.679-250A>G | ||||||||
F56D12.1d.1:c.259-250A>G | ||||||||
F56D12.1a.1:c.679-250A>G | ||||||||
HGVSg | CHROMOSOME_II:g.1308265T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | CTTGTAGTTTGTAGTCTAGCAGACCAAATTTCTTCAAAAC | ACTTGGGTCTGCTAAATCGAAACTTGTAGTTTGTAGCCTA | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1308272 | 1308272 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1b.1:c.679-250A>G | |||||||
Intron_number | 5/7 | |||||||
F56D12.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1a.2:c.679-250A>G | |||||||
Intron_number | 6/9 | |||||||
F56D12.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1a.1:c.679-250A>G | |||||||
Intron_number | 5/8 | |||||||
F56D12.1d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1d.1:c.259-250A>G | |||||||
Intron_number | 1/3 | |||||||
F56D12.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56D12.1c.1:c.679-250A>G | |||||||
Intron_number | 4/5 | |||||||
Method | WGS_Flibotte |