WormBase Tree Display for Variation: WBVar01533965
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WBVar01533965 | Name | Public_name | WBVar01533965 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00080075 | |||||||
F56D12.1d.1:c.492C>T | ||||||||
CE40074:p.Asn164= | ||||||||
CE33403:p.Asn304= | ||||||||
F56D12.1c.1:c.912C>T | ||||||||
F56D12.1a.1:c.912C>T | ||||||||
CE37118:p.Asn304= | ||||||||
F56D12.1a.2:c.912C>T | ||||||||
F56D12.1b.1:c.912C>T | ||||||||
CE29047:p.Asn304= | ||||||||
HGVSg | CHROMOSOME_II:g.1307782G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | TTCTCCGATGAGTTTCGGAAAAGTCACATA | TTATCCAAATTCTCGGCGACTTTTCTCCAA | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1307789 | 1307789 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1b.1:c.912C>T | |||||||
HGVSp | CE33403:p.Asn304= | |||||||
cDNA_position | 914 | |||||||
CDS_position | 912 | |||||||
Protein_position | 304 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.2:c.912C>T | |||||||
HGVSp | CE29047:p.Asn304= | |||||||
cDNA_position | 1011 | |||||||
CDS_position | 912 | |||||||
Protein_position | 304 | |||||||
Exon_number | 7/10 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.1:c.912C>T | |||||||
HGVSp | CE29047:p.Asn304= | |||||||
cDNA_position | 915 | |||||||
CDS_position | 912 | |||||||
Protein_position | 304 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1d.1:c.492C>T | |||||||
HGVSp | CE40074:p.Asn164= | |||||||
cDNA_position | 492 | |||||||
CDS_position | 492 | |||||||
Protein_position | 164 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
F56D12.1c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1c.1:c.912C>T | |||||||
HGVSp | CE37118:p.Asn304= | |||||||
cDNA_position | 912 | |||||||
CDS_position | 912 | |||||||
Protein_position | 304 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
Method | WGS_Flibotte |