WormBase Tree Display for Variation: WBVar01531325
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WBVar01531325 | Name | Public_name | WBVar01531325 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00071196 | |||||||
F12B6.2c.1:c.925A>G | ||||||||
CE30513:p.Ile309Val | ||||||||
CE30512:p.Ile351Val | ||||||||
F12B6.2a.1:c.1051A>G | ||||||||
HGVSg | CHROMOSOME_I:g.2253714A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F12B6 | ||||
Flanking_sequences | TTCCCATTTTCAGCCAGTTTTGCCAGCGCA | TCTTCATTGTGATCGCCGCCTACGGCCCGT | ||||||
Mapping_target | F12B6 | |||||||
Source_location | 225 | CHROMOSOME_I | 2253716 | 2253716 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00017398 | ||||||
Transcript | F12B6.2c.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.81 | tolerated | ||||||
PolyPhen | 0.015 | benign | ||||||
HGVSc | F12B6.2c.1:c.925A>G | |||||||
HGVSp | CE30513:p.Ile309Val | |||||||
cDNA_position | 925 | |||||||
CDS_position | 925 | |||||||
Protein_position | 309 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | Atc/Gtc | |||||||
Amino_acid_change | I/V | |||||||
F12B6.2a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.9 | tolerated | ||||||
PolyPhen | 0.015 | benign | ||||||
HGVSc | F12B6.2a.1:c.1051A>G | |||||||
HGVSp | CE30512:p.Ile351Val | |||||||
cDNA_position | 1080 | |||||||
CDS_position | 1051 | |||||||
Protein_position | 351 | |||||||
Exon_number | 9/14 | |||||||
Codon_change | Atc/Gtc | |||||||
Amino_acid_change | I/V | |||||||
Method | WGS_Flibotte |