WormBase Tree Display for Variation: WBVar01526949

WBVar01526949 Name: Public_name: WBVar01526949
    Other_name (13)
    HGVSg: CHROMOSOME_X:g.7857595C>T
  Sequence_details: SMap: S_parent: Sequence: C54D2
    Flanking_sequences: CATCCCGAGGGTTACACAATTAATCATAAT ACAGCCATTGTTATTCGGTCAAACCAAGGA
    Mapping_target: C54D2
    Source_location: 225 CHROMOSOME_X 7857545 7857545 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (33)
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00000367
    Transcript: C54D2.5a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.1:c.417G>A
        HGVSp: CE30919:p.Val139=
        cDNA_position: 545
        CDS_position: 417
        Protein_position: 139
        Exon_number: 7/32
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5g.1:c.417G>A
        HGVSp: CE50172:p.Val139=
        cDNA_position: 417
        CDS_position: 417
        Protein_position: 139
        Exon_number: 5/29
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5a.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.2:c.417G>A
        HGVSp: CE30919:p.Val139=
        cDNA_position: 579
        CDS_position: 417
        Protein_position: 139
        Exon_number: 8/33
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5c.1:c.417G>A
        HGVSp: CE36115:p.Val139=
        cDNA_position: 493
        CDS_position: 417
        Protein_position: 139
        Exon_number: 6/31
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5a.3 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5a.3:c.417G>A
        HGVSp: CE30919:p.Val139=
        cDNA_position: 494
        CDS_position: 417
        Protein_position: 139
        Exon_number: 6/31
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5d.1:c.417G>A
        HGVSp: CE36116:p.Val139=
        cDNA_position: 493
        CDS_position: 417
        Protein_position: 139
        Exon_number: 6/32
        Codon_change: gtG/gtA
        Amino_acid_change: V
      C54D2.5e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: C54D2.5e.1:c.417G>A
        HGVSp: CE36117:p.Val139=
        cDNA_position: 493
        CDS_position: 417
        Protein_position: 139
        Exon_number: 6/31
        Codon_change: gtG/gtA
        Amino_acid_change: V
  Method: WGS_Flibotte