WormBase Tree Display for Variation: WBVar01518589
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WBVar01518589 | Name | Public_name | WBVar01518589 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (5) | ||||||||
HGVSg | CHROMOSOME_V:g.485850C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T01G6 | ||||
Flanking_sequences | CTTAGATGTGTCCTACCTAATTGTCAAAGC | CATAATTGCCTGGATTTCCCACCTCAGATG | ||||||
Mapping_target | T01G6 | |||||||
Source_location | 225 | CHROMOSOME_V | 485851 | 485851 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020153 | ||||||
Transcript | T01G6.6b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T01G6.6b.1:c.402C>T | |||||||
HGVSp | CE42457:p.Ala134= | |||||||
cDNA_position | 435 | |||||||
CDS_position | 402 | |||||||
Protein_position | 134 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gcC/gcT | |||||||
Amino_acid_change | A | |||||||
T01G6.6a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T01G6.6a.1:c.396C>T | |||||||
HGVSp | CE35608:p.Ala132= | |||||||
cDNA_position | 473 | |||||||
CDS_position | 396 | |||||||
Protein_position | 132 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gcC/gcT | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |