WormBase Tree Display for Variation: WBVar01518587
expand all nodes | collapse all nodes | view schema
WBVar01518587 | Name | Public_name | WBVar01518587 | |||||
---|---|---|---|---|---|---|---|---|
Other_name (5) | ||||||||
HGVSg | CHROMOSOME_V:g.485748A>C | |||||||
Sequence_details | SMap | S_parent | Sequence | T01G6 | ||||
Flanking_sequences | GATCAAGCCCCGTCAGATTCCCAAAACCGT | GCCACCCTAGTGGGCCGCCCGTCGTACATT | ||||||
Mapping_target | T01G6 | |||||||
Source_location | 225 | CHROMOSOME_V | 485749 | 485749 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020153 | ||||||
Transcript | T01G6.6b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T01G6.6b.1:c.300A>C | |||||||
HGVSp | CE42457:p.Val100= | |||||||
cDNA_position | 333 | |||||||
CDS_position | 300 | |||||||
Protein_position | 100 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gtA/gtC | |||||||
Amino_acid_change | V | |||||||
T01G6.6a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T01G6.6a.1:c.294A>C | |||||||
HGVSp | CE35608:p.Val98= | |||||||
cDNA_position | 371 | |||||||
CDS_position | 294 | |||||||
Protein_position | 98 | |||||||
Exon_number | 4/8 | |||||||
Codon_change | gtA/gtC | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |