WormBase Tree Display for Variation: WBVar01509319
expand all nodes | collapse all nodes | view schema
WBVar01509319 | Name | Public_name | WBVar01509319 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00028712 | |||||||
CE33878:p.Ser558= | ||||||||
Y49E10.19.2:c.1674A>G | ||||||||
Y49E10.19.1:c.1674A>G | ||||||||
HGVSg | CHROMOSOME_III:g.12449337T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y49E10 | ||||
Flanking_sequences | GAGCGACGAGGCGGATGGTCCTTTTCGCTC | GATCTGTGACCAAGCTGTTTCGGAATCGCA | ||||||
Mapping_target | Y49E10 | |||||||
Source_location | 225 | CHROMOSOME_III | 12449236 | 12449236 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00305775 | ||||||
WBGene00013038 | ||||||||
Transcript | Y49E10.19.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y49E10.19.1:c.1674A>G | |||||||
HGVSp | CE33878:p.Ser558= | |||||||
cDNA_position | 1692 | |||||||
CDS_position | 1674 | |||||||
Protein_position | 558 | |||||||
Exon_number | 6/10 | |||||||
Codon_change | tcA/tcG | |||||||
Amino_acid_change | S | |||||||
Y49E10.19.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y49E10.19.2:c.1674A>G | |||||||
HGVSp | CE33878:p.Ser558= | |||||||
cDNA_position | 1817 | |||||||
CDS_position | 1674 | |||||||
Protein_position | 558 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | tcA/tcG | |||||||
Amino_acid_change | S | |||||||
Y49E10.38 | ||||||||
Method | WGS_Flibotte |