WormBase Tree Display for Variation: WBVar01474438

WBVar01474438 Name: Public_name: tm6423
    HGVSg: CHROMOSOME_III:g.10305830_10306351del
  Sequence_details: SMap: S_parent: Sequence: T07A5
    Flanking_sequences: aaacgttttttatacttaaagaattcttgt ctacatataatagtggaataactgggaaat
    Mapping_target: T07A5
    Source_location: 7 CHROMOSOME_III 10305829 10306352 Inferred_automatically: National_Bioresource_Project
    Type_of_mutation: Deletion
    PCR_product: tm6423_external
      tm6423_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: FX
    Author: Mitani S
    DB_info: Database: National_Bioresource_Project seq 6423
    NBP_allele
    Status: Live
  Affects: Gene: WBGene00011554
      WBGene00045475
    Transcript: T07A5.1.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        Intron_number: 2/10
        Exon_number: 1-2/11
      T07A5.7.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 1684-?
        Exon_number: 10/10
  Isolation: Mutagen: TMP/UV
  Genetics: Map: III
  Description: Phenotype_not_observed: WBPhenotype:0000062 Person_evidence: WBPerson7743
        Curator_confirmed: WBPerson712
        Remark: Classified as homozygous viable by the National BioResource Project of Japan. Person_evidence: WBPerson7743
            Curator_confirmed: WBPerson712
  Remark: 9866/9867-10388/10389 (522 bp deletion)
    This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use. Paper_evidence: WBPaper00041807
  Method: NBP_knockout_allele