WormBase Tree Display for Variation: WBVar01472906

WBVar01472906 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01472906
    Other_name: F39D8.3b.1:c.880+279G>A
      F39D8.3a.1:c.757+279G>A
      F39D8.3a.2:c.757+279G>A
    HGVSg: CHROMOSOME_X:g.15423768G>A
  Sequence_details: SMap: S_parent: Sequence: F39D8
    Flanking_sequences: GGAATTCGCGCTGTTTCTAAGGCTGCTAAA GGCTACAAGGGGCTCAGCTCCAGCCCCGCT
    Mapping_target: F39D8
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006690 From_analysis: WGS_Andersen
      WBStrain00006691 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193358208
        dbSNP_ss ss 295534127
    Status: Live
  Affects: Gene: WBGene00009561
    Transcript: F39D8.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.3a.2:c.757+279G>A
        Intron_number: 6/9
      F39D8.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.3a.1:c.757+279G>A
        Intron_number: 7/10
      F39D8.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F39D8.3b.1:c.880+279G>A
        Intron_number: 6/8
  Reference: WBPaper00040707
  Method: WGS_Andersen