WormBase Tree Display for Variation: WBVar01471762

WBVar01471762 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01471762
    Other_name: cewivar00528494
      F16H9.2b.1:c.35-41277G>A
      F16H9.2a.1:c.-23-41277G>A
      F22E10.3.1:c.638+25G>A
    HGVSg: CHROMOSOME_X:g.12748580C>T
  Sequence_details: SMap: S_parent: Sequence: F22E10
    Flanking_sequences: CTGCTGAAAATTGAGAGAAGTTAGTCTTGC CAATTATGAGTATAAGCAACTTACTCGTTC
    Mapping_target: F22E10
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023071 From_analysis: WGS_Andersen
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: Million_mutation_project_reanalysis
      WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193357064
        dbSNP_ss ss 295532983
    Status: Live
  Affects: Gene: WBGene00004008
      WBGene00008901
    Transcript: F16H9.2b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2b.1:c.35-41277G>A
        Intron_number: 1/3
      F16H9.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F16H9.2a.1:c.-23-41277G>A
        Intron_number: 1/4
      F22E10.3.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F22E10.3.1:c.638+25G>A
        Intron_number: 4/9
  Reference: WBPaper00040707
  Method: WGS_Andersen