WormBase Tree Display for Variation: WBVar01471669

WBVar01471669 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01471669
    Other_name: H20J18.1f.1:c.-98-627C>G
      H20J18.1c.1:c.305-627C>G
      H20J18.1a.3:c.-98-627C>G
    HGVSg: CHROMOSOME_X:g.12514675G>C
  Sequence_details: SMap: S_parent: Sequence: C16D6
    Flanking_sequences: GAGAGACTAGACAACTAACGAAACGAGTGT CGTTGGCGCTCCGACGCTTTATCCGGTTTG
    Mapping_target: C16D6
    Type_of_mutation: Substitution: g c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193356971
        dbSNP_ss ss 295532890
    Status: Live
  Affects: Gene: WBGene00004739
    Transcript: H20J18.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1a.3:c.-98-627C>G
        Intron_number: 1/14
      H20J18.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1f.1:c.-98-627C>G
        Intron_number: 1/14
      H20J18.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: H20J18.1c.1:c.305-627C>G
        Intron_number: 1/12
  Reference: WBPaper00040707
  Method: WGS_Andersen