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WormBase Tree Display for Variation: WBVar01470965

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Name Class

WBVar01470965EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01470965
Other_nameF31B12.1g.1:c.190+139G>A
F31B12.1i.1:c.190+139G>A
F31B12.1d.1:c.190+139G>A
F31B12.1k.1:c.190+139G>A
F31B12.1j.1:c.190+139G>A
F31B12.1l.1:c.190+139G>A
F31B12.1h.1:c.190+139G>A
HGVSgCHROMOSOME_X:g.10832061C>T
Sequence_detailsSMapS_parentSequenceC05A9
Flanking_sequencesATTTAATAAAGTAACTGTTATAAAATTCTCGTTTGAAAATAGTCTAAAGTTTCCCAGATT
Mapping_targetC05A9
Type_of_mutationSubstitutionct
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193356267
dbSNP_ssss295532186
StatusLive
AffectsGeneWBGene00004036
TranscriptF31B12.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1j.1:c.190+139G>A
Intron_number3/63
F31B12.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1g.1:c.190+139G>A
Intron_number3/63
F31B12.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1d.1:c.190+139G>A
Intron_number3/64
F31B12.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1h.1:c.190+139G>A
Intron_number3/63
F31B12.1l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1l.1:c.190+139G>A
Intron_number3/63
F31B12.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1i.1:c.190+139G>A
Intron_number3/64
F31B12.1k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF31B12.1k.1:c.190+139G>A
Intron_number3/64
ReferenceWBPaper00040707
MethodWGS_Andersen