WormBase Tree Display for Variation: WBVar01470960
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| WBVar01470960 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01470960 | ||||
| Other_name | cewivar00129205 | |||||
| F31B12.1k.1:c.1321+404A>T | ||||||
| F31B12.1i.1:c.1321+404A>T | ||||||
| F31B12.1g.1:c.1151-545A>T | ||||||
| F31B12.1l.1:c.1151-545A>T | ||||||
| F31B12.1d.1:c.1321+404A>T | ||||||
| F31B12.1j.1:c.1151-545A>T | ||||||
| F31B12.1h.1:c.1151-545A>T | ||||||
| HGVSg | CHROMOSOME_X:g.10826519T>A | |||||
| Sequence_details | SMap | S_parent | Sequence | C05A9 | ||
| Flanking_sequences | AGAATTAACTAAAAAACAAAAGTAACTTTA | CAAATATAATGAAGCTTTCTTTAACAACAG | ||||
| Mapping_target | C05A9 | |||||
| Type_of_mutation | Substitution | t | a | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004445 | From_analysis | WGS_Andersen | |||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_Andersen | ||||||
| WBStrain00004603 | From_analysis | WGS_Andersen | ||||
| WBStrain00005305 | From_analysis | WGS_Andersen | ||||
| WBStrain00005315 | From_analysis | WGS_Andersen | ||||
| WBStrain00006369 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | Million_mutation_project_reanalysis | |||||
| WGS_Andersen | ||||||
| DB_info | Database | dbSNP_rs | rs | 193356262 | ||
| dbSNP_ss | ss | 295532181 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00004036 | ||||
| Transcript | F31B12.1j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1j.1:c.1151-545A>T | |||||
| Intron_number | 11/63 | |||||
| F31B12.1g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1g.1:c.1151-545A>T | |||||
| Intron_number | 11/63 | |||||
| F31B12.1d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1d.1:c.1321+404A>T | |||||
| Intron_number | 12/64 | |||||
| F31B12.1h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1h.1:c.1151-545A>T | |||||
| Intron_number | 11/63 | |||||
| F31B12.1l.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1l.1:c.1151-545A>T | |||||
| Intron_number | 11/63 | |||||
| F31B12.1i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1i.1:c.1321+404A>T | |||||
| Intron_number | 12/64 | |||||
| F31B12.1k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | F31B12.1k.1:c.1321+404A>T | |||||
| Intron_number | 12/64 | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
