WormBase Tree Display for Variation: WBVar01469873

WBVar01469873 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01469873
    Other_name: C54D2.5a.2:c.-77+3845G>A
      C54D2.5a.1:c.-77+3937G>A
    HGVSg: CHROMOSOME_X:g.7871966C>T
  Sequence_details: SMap: S_parent: Sequence: EGAP3
    Flanking_sequences: AGGGAAACAAAAACATAAACAAATAAACTG TTTTTTTTAAAATCTTATTATTAAATTTAT
    Mapping_target: EGAP3
    Type_of_mutation: Substitution: c t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193355175
        dbSNP_ss ss 295531094
    Status: Live
  Affects: Gene: WBGene00000367
    Transcript: C54D2.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D2.5a.1:c.-77+3937G>A
        Intron_number: 1/31
      C54D2.5a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54D2.5a.2:c.-77+3845G>A
        Intron_number: 2/32
  Reference: WBPaper00040707
  Method: WGS_Andersen