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WormBase Tree Display for Variation: WBVar01469872

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Name Class

WBVar01469872EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01469872
Other_namecewivar00527478
C54D2.5a.2:c.-76-6020T>A
C54D2.5a.1:c.-76-6020T>A
HGVSgCHROMOSOME_X:g.7867327A>T
Sequence_detailsSMapS_parentSequenceEGAP3
Flanking_sequencesCTGAACATTAAAACATCAAATTCGCTTTTATTGTTTGCTTTGATCGAAAACTTCAAAAAT
Mapping_targetEGAP3
Type_of_mutationSubstitutionat
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_rsrs193355174
dbSNP_ssss295531093
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-76-6020T>A
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-76-6020T>A
Intron_number2/32
ReferenceWBPaper00040707
MethodWGS_Andersen