WormBase Tree Display for Variation: WBVar01457278
expand all nodes | collapse all nodes | view schema
| WBVar01457278 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01457278 | ||||
| Other_name | B0348.6c.1:c.*305A>G | |||||
| B0348.5a.1:c.*120T>C | ||||||
| B0348.6a.1:c.*305A>G | ||||||
| B0348.6b.1:c.*305A>G | ||||||
| B0348.5b.1:c.*120T>C | ||||||
| HGVSg | CHROMOSOME_V:g.6631T>C | |||||
| Sequence_details | SMap | S_parent | Sequence | B0348 | ||
| Flanking_sequences | ATTTATATTTACCGAATAAATATATATTCA | CAATTAACCTGAAGAACAAACGAATTCGGC | ||||
| Mapping_target | B0348 | |||||
| Type_of_mutation | Substitution | t | c | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00022900 | From_analysis | WGS_Andersen | |||
| WBStrain00022901 | From_analysis | WGS_Andersen | ||||
| WBStrain00022998 | From_analysis | WGS_Andersen | ||||
| WBStrain00023083 | From_analysis | WGS_Andersen | ||||
| WBStrain00023152 | From_analysis | WGS_Andersen | ||||
| WBStrain00023164 | From_analysis | WGS_Andersen | ||||
| WBStrain00023176 | From_analysis | WGS_Andersen | ||||
| WBStrain00023177 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | WGS_Andersen | |||||
| DB_info | Database | dbSNP_rs | rs | 193342935 | ||
| dbSNP_ss | ss | 295518854 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00002061 | ||||
| WBGene00015153 | ||||||
| Transcript | B0348.6c.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0348.6c.1:c.*305A>G | |||||
| cDNA_position | 1068 | |||||
| Exon_number | 6/6 | |||||
| B0348.6a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0348.6a.1:c.*305A>G | |||||
| cDNA_position | 1056 | |||||
| Exon_number | 6/6 | |||||
| B0348.5a.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0348.5a.1:c.*120T>C | |||||
| cDNA_position | 1354 | |||||
| Exon_number | 5/5 | |||||
| B0348.6b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0348.6b.1:c.*305A>G | |||||
| cDNA_position | 1067 | |||||
| Exon_number | 6/6 | |||||
| B0348.5b.1 | VEP_consequence | 3_prime_UTR_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0348.5b.1:c.*120T>C | |||||
| cDNA_position | 1039 | |||||
| Exon_number | 4/4 | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
