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WormBase Tree Display for Variation: WBVar01456231

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Name Class

WBVar01456231EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01456231
Other_namecewivar00345432
Y105C5A.17a.1:n.66-614C>A
Y105C5A.17c.1:n.119+428C>A
Y105C5A.17b.1:n.119+428C>A
HGVSgCHROMOSOME_IV:g.15725064C>A
Sequence_detailsSMapS_parentSequenceY105C5A
Flanking_sequencesATTTTCAGTTACTAAATATTGAGTACTATCAAGTCTCAAACAAATACAAAAACGATATGA
Mapping_targetY105C5A
Type_of_mutationSubstitutionca
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00006631From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00006636From_analysisWGS_Andersen
WBStrain00006690From_analysisWGS_Andersen
WBStrain00006691From_analysisWGS_Andersen
WBStrain00006698From_analysisWGS_Andersen
WBStrain00023065From_analysisWGS_Andersen
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WGS_Andersen
WBStrain00023084From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisMillion_mutation_project_reanalysis
WGS_Andersen
DB_infoDatabasedbSNP_rsrs193341888
dbSNP_ssss295517807
StatusLive
AffectsGeneWBGene00013640
TranscriptY105C5A.17aVEP_consequenceintron_variant,non_coding_transcript_variant
VEP_impactMODIFIER
HGVScY105C5A.17a.1:n.66-614C>A
Intron_number1/3
Y105C5A.17bVEP_consequenceintron_variant,non_coding_transcript_variant
VEP_impactMODIFIER
HGVScY105C5A.17b.1:n.119+428C>A
Intron_number2/4
Y105C5A.17cVEP_consequenceintron_variant,non_coding_transcript_variant
VEP_impactMODIFIER
HGVScY105C5A.17c.1:n.119+428C>A
Intron_number2/5
ReferenceWBPaper00040707
MethodWGS_Andersen