WormBase Tree Display for Variation: WBVar01454899

WBVar01454899 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01454899
    Other_name: C48D1.5e.1:c.543+1720A>T
      C48D1.5f.1:c.465+1720A>T
      C48D1.5d.1:c.597+1720A>T
      C48D1.5c.1:c.675+1720A>T
    HGVSg: CHROMOSOME_IV:g.13230125A>T
  Sequence_details: SMap: S_parent: Sequence: JC8
    Flanking_sequences: CTGTGCATTTCACGTAAGATTTACTTTTTT AAAACTTAAACTAATTTTGAAATATTCAAT
    Mapping_target: JC8
    Type_of_mutation: Substitution: a t
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193340556
        dbSNP_ss ss 295516475
    Status: Live
  Affects: Gene: WBGene00008178
    Transcript: C48D1.5e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D1.5e.1:c.543+1720A>T
        Intron_number: 4/4
      C48D1.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D1.5c.1:c.675+1720A>T
        Intron_number: 6/6
      C48D1.5f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D1.5f.1:c.465+1720A>T
        Intron_number: 3/3
      C48D1.5d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C48D1.5d.1:c.597+1720A>T
        Intron_number: 5/6
  Reference: WBPaper00040707
  Method: WGS_Andersen