WormBase Tree Display for Variation: WBVar01450083
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| WBVar01450083 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01450083 | ||||
| Other_name (16) | ||||||
| HGVSg | CHROMOSOME_IV:g.356362C>T | |||||
| Sequence_details | SMap | S_parent | Sequence | Y66H1B | ||
| Flanking_sequences | TGGACGAATTCCAGCGGCTCTGGATTCAGA | TTTCACTCAGACAACACAAAAGTGTGCTAT | ||||
| Mapping_target | Y66H1B | |||||
| Type_of_mutation | Substitution | c | t | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004612 | From_analysis | WGS_Andersen | |||
| WBStrain00005832 | From_analysis | WGS_Andersen | ||||
| WBStrain00023283 | From_analysis | WGS_Andersen | ||||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | WGS_Andersen | |||||
| DB_info | Database | dbSNP_rs | rs | 193335740 | ||
| dbSNP_ss | ss | 295511659 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00017576 | ||||
| Transcript | F18F11.3e.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3e.1:c.3801C>T | |||||
| HGVSp | CE48897:p.Asp1267= | |||||
| cDNA_position | 3801 | |||||
| CDS_position | 3801 | |||||
| Protein_position | 1267 | |||||
| Exon_number | 20/26 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3g.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3g.1:c.3699C>T | |||||
| HGVSp | CE48651:p.Asp1233= | |||||
| cDNA_position | 3699 | |||||
| CDS_position | 3699 | |||||
| Protein_position | 1233 | |||||
| Exon_number | 20/26 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3f.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3f.1:c.3606C>T | |||||
| HGVSp | CE48990:p.Asp1202= | |||||
| cDNA_position | 3606 | |||||
| CDS_position | 3606 | |||||
| Protein_position | 1202 | |||||
| Exon_number | 19/25 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3h.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3h.1:c.3894C>T | |||||
| HGVSp | CE48833:p.Asp1298= | |||||
| cDNA_position | 3894 | |||||
| CDS_position | 3894 | |||||
| Protein_position | 1298 | |||||
| Exon_number | 21/27 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3d.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3d.1:c.3894C>T | |||||
| HGVSp | CE48822:p.Asp1298= | |||||
| cDNA_position | 3894 | |||||
| CDS_position | 3894 | |||||
| Protein_position | 1298 | |||||
| Exon_number | 21/26 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3a.1:c.3801C>T | |||||
| HGVSp | CE48879:p.Asp1267= | |||||
| cDNA_position | 3801 | |||||
| CDS_position | 3801 | |||||
| Protein_position | 1267 | |||||
| Exon_number | 20/26 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3b.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3b.1:c.3606C>T | |||||
| HGVSp | CE48922:p.Asp1202= | |||||
| cDNA_position | 3606 | |||||
| CDS_position | 3606 | |||||
| Protein_position | 1202 | |||||
| Exon_number | 19/24 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| F18F11.3c.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | |||||
| HGVSc | F18F11.3c.1:c.3699C>T | |||||
| HGVSp | CE48565:p.Asp1233= | |||||
| cDNA_position | 3699 | |||||
| CDS_position | 3699 | |||||
| Protein_position | 1233 | |||||
| Exon_number | 20/25 | |||||
| Codon_change | gaC/gaT | |||||
| Amino_acid_change | D | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
