WormBase Tree Display for Variation: WBVar01447693
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WBVar01447693 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01447693 | ||||
Other_name | CE00423:p.Val544= | |||||
ZK632.6b.1:c.1095G>C | ||||||
ZK632.6a.1:c.1632G>C | ||||||
CE49246:p.Val365= | ||||||
HGVSg | CHROMOSOME_III:g.9814867C>G | |||||
Sequence_details | SMap | S_parent | Sequence | ZK632 | ||
Flanking_sequences | GCTCTGGGAACCGGATGGTCCAGGCTGATT | ACATCGTCTTCCTCATCTCCAATAATTTCT | ||||
Mapping_target | ZK632 | |||||
Type_of_mutation | Substitution | c | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00027652 | From_analysis | WGS_Andersen | |||
Million_mutation_project_reanalysis | ||||||
WBStrain00027664 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193334090 | ||
dbSNP_ss | ss | 295510009 | ||||
Status | Live | |||||
Affects | Gene | WBGene00000567 | ||||
Transcript | ZK632.6a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | ZK632.6a.1:c.1632G>C | |||||
HGVSp | CE00423:p.Val544= | |||||
cDNA_position | 1638 | |||||
CDS_position | 1632 | |||||
Protein_position | 544 | |||||
Exon_number | 7/8 | |||||
Codon_change | gtG/gtC | |||||
Amino_acid_change | V | |||||
ZK632.6b.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | ZK632.6b.1:c.1095G>C | |||||
HGVSp | CE49246:p.Val365= | |||||
cDNA_position | 1095 | |||||
CDS_position | 1095 | |||||
Protein_position | 365 | |||||
Exon_number | 4/4 | |||||
Codon_change | gtG/gtC | |||||
Amino_acid_change | V | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |