WormBase Tree Display for Variation: WBVar01447470
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WBVar01447470 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01447470 | ||||
Other_name | K01B6.1.3:c.396A>G | |||||
CE00238:p.Gln132= | ||||||
K01B6.1.2:c.396A>G | ||||||
K01B6.1.1:c.396A>G | ||||||
HGVSg | CHROMOSOME_III:g.9293893A>G | |||||
Sequence_details | SMap | S_parent | Sequence | K01B6 | ||
Flanking_sequences | ACAGCAGCAACAAAATCAGAATCCGAGTCA | AGTCAGTCTTCTTCCAGTGACCGTAAGAGG | ||||
Mapping_target | K01B6 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193333939 | ||
dbSNP_ss | ss | 295509858 | ||||
Status | Live | |||||
Affects | Gene | WBGene00010453 | ||||
Transcript | K01B6.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | K01B6.1.1:c.396A>G | |||||
HGVSp | CE00238:p.Gln132= | |||||
cDNA_position | 559 | |||||
CDS_position | 396 | |||||
Protein_position | 132 | |||||
Exon_number | 4/10 | |||||
Codon_change | caA/caG | |||||
Amino_acid_change | Q | |||||
K01B6.1.2 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | K01B6.1.2:c.396A>G | |||||
HGVSp | CE00238:p.Gln132= | |||||
cDNA_position | 609 | |||||
CDS_position | 396 | |||||
Protein_position | 132 | |||||
Exon_number | 5/11 | |||||
Codon_change | caA/caG | |||||
Amino_acid_change | Q | |||||
K01B6.1.3 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | K01B6.1.3:c.396A>G | |||||
HGVSp | CE00238:p.Gln132= | |||||
cDNA_position | 613 | |||||
CDS_position | 396 | |||||
Protein_position | 132 | |||||
Exon_number | 5/11 | |||||
Codon_change | caA/caG | |||||
Amino_acid_change | Q | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |